Difference between revisions of "TSS:Mm 101606.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000093191.2:0 NM_027411:0 uc007ilc.2:0 AK012927:0 BC006674:8 AK011138:19 ENSMUST00000148387.1:40 AK163303:40 AK139553:117 |chr=chr11 |cpg_perce...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |2600001J17Rik= |
| + | |2810049B11Rik= | ||
| + | |AA409762= | ||
| + | |Ccdc99= | ||
| + | |all_trans=MGI:1917635 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-6 | |distance_to_tss=-6 | ||
|end=34833663 | |end=34833663 | ||
| + | |end_of_center_position=34833648 | ||
|entrez_id=70385 | |entrez_id=70385 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=1700018I02Rik | + | |gene_alias=1700018I02Rik{{!}}2600001J17Rik{{!}}2810049B11Rik{{!}}AA409762{{!}}Ccdc99 |
|gene_description=spindle apparatus coiled-coil protein 1 | |gene_description=spindle apparatus coiled-coil protein 1 | ||
|gene_id=70385 | |gene_id=70385 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_027411 | |nearest_refseq=NM_027411 | ||
|nearest_unigene=Mm.194368 | |nearest_unigene=Mm.194368 | ||
| − | |num_trans= | + | |num_trans=70385 |
|species=mouse | |species=mouse | ||
|start=34833631 | |start=34833631 | ||
| + | |start_of_center_position=34833647 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000093191 | + | |transcript_name=ENSMUST00000093191.2 AK012927 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101606.1 | |tss_id=mm_101606.1 | ||
Latest revision as of 11:03, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 34833647 |
|---|---|
| End of the center position in the TSS region: | 34833648 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000093191.2 AK012927 |
|---|---|
| Distance: | 0 |
| Num_trans: | 70385 |
| All_trans: | MGI:1917635 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_027411 |
| Entrez ID: | 70385 |
| Nearest Unigene: | Mm.194368 |
| Nearest Refseq: | NM_027411 |
| Nearest Ensembl: | ENSMUSG00000069910 |
| Gene Name: | spindle apparatus coiled-coil protein 1 |
| Gene Alias: | 1700018I02Rik|2600001J17Rik|2810049B11Rik|AA409762|Ccdc99 |
| Gene Description: | spindle apparatus coiled-coil protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
