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Difference between revisions of "TSS:Mm 101624.1"

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Line 3: Line 3:
 
|BC037006=
 
|BC037006=
 
|Kibra=
 
|Kibra=
|all_trans=AK220259:-11 ENSMUST00000018993.6:-71 NM_170779:-71 KY442316:-143 AB271907:354 DQ256090:354
+
|all_trans=MGI:2388637
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.16
 
|cpg_percent=0.16
Line 26: Line 26:
 
|nearest_refseq=NM_170779
 
|nearest_refseq=NM_170779
 
|nearest_unigene=Mm.31267
 
|nearest_unigene=Mm.31267
|num_trans=6
+
|num_trans=211652
 
|species=mouse
 
|species=mouse
 
|start=35980442
 
|start=35980442

Latest revision as of 11:04, 26 July 2021

Basic information about the TSS


TSS ID:mm_101624.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:35980442
End:35980456
Strand:-
TSS Score:1
Start of the center position in the TSS region:35980449
End of the center position in the TSS region:35980450



Gene and protein annotation


Transcript_name:AK220259
Distance:-11
GeneID:211652
HGNC/MGI_ID:MGI:2388637
UniProt_ID:
Gene_name:WW, C2 and coiled-coil domain containing 1
Gene_symbol:Wwc1
Gene_synonyms:Kibra
Gene_source:MGI:2388637



Transcript annotation


Transcript_name:AK220259
Distance:-11
Num_trans:211652
All_trans:MGI:2388637



TATA-Box annotation


Distance to TSS:78
Nearest PromoterID:NM_170779
Entrez ID:211652
Nearest Unigene:Mm.31267
Nearest Refseq:NM_170779
Nearest Ensembl:ENSMUSG00000018849
Gene Name:WW, C2 and coiled-coil domain containing 1
Gene Alias:AA408228|AU017197|BC037006|Kibra
Gene Description:WW, C2 and coiled-coil domain containing 1
Gene Type:protein-coding
CpG%:0.16
GC%:0.80597
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):