Difference between revisions of "TSS:Mm 101633.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AU017197= |
| + | |BC037006= | ||
| + | |Kibra= | ||
| + | |all_trans=MGI:1345184 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=329 | |distance=329 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-452086 |
|end=36432622 | |end=36432622 | ||
| + | |end_of_center_position=36432614 | ||
|entrez_id=211652 | |entrez_id=211652 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=AA408228 | + | |gene_alias=AA408228{{!}}AU017197{{!}}BC037006{{!}}Kibra |
| − | |gene_description= | + | |gene_description=WW, C2 and coiled-coil domain containing 1 |
|gene_id=23964 | |gene_id=23964 | ||
|gene_name=teneurin transmembrane protein 2 | |gene_name=teneurin transmembrane protein 2 | ||
| Line 17: | Line 21: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1345184 | |hgnc_mgi_id=MGI:1345184 | ||
| + | |mKIAA0869= | ||
|nearest_ensembl=ENSMUSG00000018849 | |nearest_ensembl=ENSMUSG00000018849 | ||
|nearest_promoter_id=NM_170779 | |nearest_promoter_id=NM_170779 | ||
|nearest_refseq=NM_170779 | |nearest_refseq=NM_170779 | ||
|nearest_unigene=Mm.31267 | |nearest_unigene=Mm.31267 | ||
| − | |num_trans= | + | |num_trans=23964 |
|species=mouse | |species=mouse | ||
|start=36432604 | |start=36432604 | ||
| + | |start_of_center_position=36432613 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-90(CCTTTTAGAGTC,+,0.00) |
|transcript_name=ENSMUST00000128501.1 | |transcript_name=ENSMUST00000128501.1 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 11:04, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 36432613 |
|---|---|
| End of the center position in the TSS region: | 36432614 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000128501.1 |
|---|---|
| Distance: | 329 |
| Num_trans: | 23964 |
| All_trans: | MGI:1345184 |
TATA-Box annotation
| Distance to TSS: | -452086 |
|---|---|
| Nearest PromoterID: | NM_170779 |
| Entrez ID: | 211652 |
| Nearest Unigene: | Mm.31267 |
| Nearest Refseq: | NM_170779 |
| Nearest Ensembl: | ENSMUSG00000018849 |
| Gene Name: | teneurin transmembrane protein 2 |
| Gene Alias: | AA408228|AU017197|BC037006|Kibra |
| Gene Description: | WW, C2 and coiled-coil domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -90(CCTTTTAGAGTC,+,0.00) |
