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Difference between revisions of "TSS:Mm 101689.1"

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Line 6: Line 6:
 
|MATIIbeta=
 
|MATIIbeta=
 
|TGR=
 
|TGR=
|all_trans=ENSMUST00000101347.9:4 NM_001199274:4 LF198435:-71 MA434012:-71 ENSMUST00000135617.1:220 AK162087:266 AK075947:266 AK075600:301
+
|all_trans=MGI:1913667
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 28: Line 28:
 
|nearest_refseq=NM_134017
 
|nearest_refseq=NM_134017
 
|nearest_unigene=Mm.293771
 
|nearest_unigene=Mm.293771
|num_trans=8
+
|num_trans=108645
 
|species=mouse
 
|species=mouse
 
|start=40695206
 
|start=40695206
 
|start_of_center_position=40695214
 
|start_of_center_position=40695214
 
|strand=-
 
|strand=-
|transcript_name=ENSMUST00000101347.9 NM_001199274
+
|transcript_name=ENSMUST00000101347.9
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_101689.1
 
|tss_id=mm_101689.1

Latest revision as of 11:05, 26 July 2021

Basic information about the TSS


TSS ID:mm_101689.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:40695206
End:40695223
Strand:-
TSS Score:1
Start of the center position in the TSS region:40695214
End of the center position in the TSS region:40695215



Gene and protein annotation


Transcript_name:ENSMUST00000101347.9
Distance:4
GeneID:108645
HGNC/MGI_ID:MGI:1913667
UniProt_ID:Q99LB6
Gene_name:methionine adenosyltransferase II, beta
Gene_symbol:Mat2b
Gene_synonyms:1110064C04Rik 2410018D16Rik MATIIbeta
Gene_source:MGI:1913667



Transcript annotation


Transcript_name:ENSMUST00000101347.9
Distance:4
Num_trans:108645
All_trans:MGI:1913667



TATA-Box annotation


Distance to TSS:-12
Nearest PromoterID:NM_001199274
Entrez ID:108645
Nearest Unigene:Mm.293771
Nearest Refseq:NM_134017
Nearest Ensembl:ENSMUSG00000042032
Gene Name:methionine adenosyltransferase II, beta
Gene Alias:1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR
Gene Description:methionine adenosyltransferase II, beta
Gene Type:protein-coding
CpG%:0.02
GC%:0.393035
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):