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Difference between revisions of "TSS:Mm 101704.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Gabrg-2=
 
|Gabrg-2=
|all_trans=AK047085:-12 AK136889:-40 AF233775:-51 AF233776:-51 AF233777:-51 AF233778:-51 AF233779:-51 AF233780:-51 AF233781:-51 AF233782:-51 AF233783:-51 AF233784:-51 AF233785:-51 AF233786:-51 AF233787:-51 AF233788:-51 AF233789:-51 AF233790:-51 AF233791:-51 AF233792:-51 AF233793:-51 AF233794:-51 AF233795:-51 AF233796:-51 AF233797:-51 AF233798:-51 AF233799:-51 AF233800:-51 AF233801:-51 AF233802:-51 AK141129:-75 ENSMUST00000109290.1:-77 AK049857:-77 M86572:-228 ENSMUST00000070735.9:-253 BC031762:-253 M62374:-399 AK034338:-405
+
|all_trans=MGI:95623
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 24: Line 24:
 
|nearest_refseq=NM_008073
 
|nearest_refseq=NM_008073
 
|nearest_unigene=Mm.5309
 
|nearest_unigene=Mm.5309
|num_trans=38
+
|num_trans=14406
 
|species=mouse
 
|species=mouse
 
|start=42000268
 
|start=42000268

Latest revision as of 11:06, 26 July 2021

Basic information about the TSS


TSS ID:mm_101704.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:42000268
End:42000279
Strand:-
TSS Score:1
Start of the center position in the TSS region:42000273
End of the center position in the TSS region:42000274



Gene and protein annotation


Transcript_name:AK047085
Distance:-12
GeneID:14406
HGNC/MGI_ID:MGI:95623
UniProt_ID:Q8C8H5
Gene_name:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene_symbol:Gabrg2
Gene_synonyms:GABAA-R Gabrg-2 gamma2
Gene_source:MGI:95623



Transcript annotation


Transcript_name:AK047085
Distance:-12
Num_trans:14406
All_trans:MGI:95623



TATA-Box annotation


Distance to TSS:583
Nearest PromoterID:NM_001362655
Entrez ID:14406
Nearest Unigene:Mm.5309
Nearest Refseq:NM_008073
Nearest Ensembl:ENSMUSG00000020436
Gene Name:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene Alias:GABAA-R|Gabrg-2|gamma2
Gene Description:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene Type:protein-coding
CpG%:0.045
GC%:0.492537
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):