Personal tools

Difference between revisions of "TSS:Mm 101706.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Gabrg-2=
 
|Gabrg-2=
|all_trans=M86572:-26 ENSMUST00000070735.9:-51 BC031762:-51 ENSMUST00000109290.1:117 AK049857:117 AK141129:119 AF233775:143 AF233776:143 AF233777:143 AF233778:143 AF233779:143 AF233780:143 AF233781:143 AF233782:143 AF233783:143 AF233784:143 AF233785:143 AF233786:143 AF233787:143 AF233788:143 AF233789:143 AF233790:143 AF233791:143 AF233792:143 AF233793:143 AF233794:143 AF233795:143 AF233796:143 AF233797:143 AF233798:143 AF233799:143 AF233800:143 AF233801:143 AF233802:143 AK136889:154 AK047085:182 M62374:-197 AK034338:-203 ENSMUST00000070725.10:-376 NM_008073:-376 NM_001362656:-376 NM_001362655:-376 NM_177408:-376
+
|all_trans=MGI:95623
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 24: Line 24:
 
|nearest_refseq=NM_008073
 
|nearest_refseq=NM_008073
 
|nearest_unigene=Mm.5309
 
|nearest_unigene=Mm.5309
|num_trans=43
+
|num_trans=14406
 
|species=mouse
 
|species=mouse
 
|start=42000472
 
|start=42000472

Latest revision as of 11:06, 26 July 2021

Basic information about the TSS


TSS ID:mm_101706.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:42000472
End:42000481
Strand:-
TSS Score:1
Start of the center position in the TSS region:42000476
End of the center position in the TSS region:42000477



Gene and protein annotation


Transcript_name:M86572
Distance:-26
GeneID:14406
HGNC/MGI_ID:MGI:95623
UniProt_ID:
Gene_name:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene_symbol:Gabrg2
Gene_synonyms:GABAA-R Gabrg-2 gamma2
Gene_source:MGI:95623



Transcript annotation


Transcript_name:M86572
Distance:-26
Num_trans:14406
All_trans:MGI:95623



TATA-Box annotation


Distance to TSS:380
Nearest PromoterID:NM_001362655
Entrez ID:14406
Nearest Unigene:Mm.5309
Nearest Refseq:NM_008073
Nearest Ensembl:ENSMUSG00000020436
Gene Name:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene Alias:GABAA-R|Gabrg-2|gamma2
Gene Description:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene Type:protein-coding
CpG%:0.02
GC%:0.462687
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):