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Difference between revisions of "TSS:Mm 101707.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Gabrg-2=
 
|Gabrg-2=
|all_trans=ENSMUST00000070735.9:7 BC031762:7 M86572:32 M62374:-86 AK034338:-92 ENSMUST00000109290.1:183 AK049857:183 AK141129:185 AF233775:209 AF233776:209 AF233777:209 AF233778:209 AF233779:209 AF233780:209 AF233781:209 AF233782:209 AF233783:209 AF233784:209 AF233785:209 AF233786:209 AF233787:209 AF233788:209 AF233789:209 AF233790:209 AF233791:209 AF233792:209 AF233793:209 AF233794:209 AF233795:209 AF233796:209 AF233797:209 AF233798:209 AF233799:209 AF233800:209 AF233801:209 AF233802:209 AK136889:220 AK047085:248 ENSMUST00000070725.10:-265 NM_008073:-265 NM_001362656:-265 NM_001362655:-265 NM_177408:-265
+
|all_trans=MGI:95623
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 24: Line 24:
 
|nearest_refseq=NM_008073
 
|nearest_refseq=NM_008073
 
|nearest_unigene=Mm.5309
 
|nearest_unigene=Mm.5309
|num_trans=43
+
|num_trans=14406
 
|species=mouse
 
|species=mouse
 
|start=42000538
 
|start=42000538

Latest revision as of 11:06, 26 July 2021

Basic information about the TSS


TSS ID:mm_101707.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:42000538
End:42000592
Strand:-
TSS Score:1
Start of the center position in the TSS region:42000565
End of the center position in the TSS region:42000566



Gene and protein annotation


Transcript_name:ENSMUST00000070735.9 BC031762
Distance:7
GeneID:14406
HGNC/MGI_ID:MGI:95623
UniProt_ID:P22723
Gene_name:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene_symbol:Gabrg2
Gene_synonyms:GABAA-R Gabrg-2 gamma2
Gene_source:MGI:95623



Transcript annotation


Transcript_name:ENSMUST00000070735.9 BC031762
Distance:7
Num_trans:14406
All_trans:MGI:95623



TATA-Box annotation


Distance to TSS:292
Nearest PromoterID:NM_001362655
Entrez ID:14406
Nearest Unigene:Mm.5309
Nearest Refseq:NM_008073
Nearest Ensembl:ENSMUSG00000020436
Gene Name:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene Alias:GABAA-R|Gabrg-2|gamma2
Gene Description:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene Type:protein-coding
CpG%:0.02
GC%:0.462687
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):