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Difference between revisions of "TSS:Mm 101708.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Gabrg-2=
 
|Gabrg-2=
|all_trans=M62374:-2 AK034338:-8 ENSMUST00000070735.9:138 BC031762:138 M86572:163 ENSMUST00000070725.10:-181 NM_008073:-181 NM_001362656:-181 NM_001362655:-181 NM_177408:-181 ENSMUST00000109290.1:314 AK049857:314 AK141129:316 AF233775:340 AF233776:340 AF233777:340 AF233778:340 AF233779:340 AF233780:340 AF233781:340 AF233782:340 AF233783:340 AF233784:340 AF233785:340 AF233786:340 AF233787:340 AF233788:340 AF233789:340 AF233790:340 AF233791:340 AF233792:340 AF233793:340 AF233794:340 AF233795:340 AF233796:340 AF233797:340 AF233798:340 AF233799:340 AF233800:340 AF233801:340 AF233802:340 AK136889:351 AK047085:379
+
|all_trans=MGI:95623
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 24: Line 24:
 
|nearest_refseq=NM_008073
 
|nearest_refseq=NM_008073
 
|nearest_unigene=Mm.5309
 
|nearest_unigene=Mm.5309
|num_trans=43
+
|num_trans=14406
 
|species=mouse
 
|species=mouse
 
|start=42000669
 
|start=42000669

Latest revision as of 11:06, 26 July 2021

Basic information about the TSS


TSS ID:mm_101708.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:42000669
End:42000676
Strand:-
TSS Score:1
Start of the center position in the TSS region:42000672
End of the center position in the TSS region:42000673



Gene and protein annotation


Transcript_name:M62374
Distance:-2
GeneID:14406
HGNC/MGI_ID:MGI:95623
UniProt_ID:
Gene_name:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene_symbol:Gabrg2
Gene_synonyms:GABAA-R Gabrg-2 gamma2
Gene_source:MGI:95623



Transcript annotation


Transcript_name:M62374
Distance:-2
Num_trans:14406
All_trans:MGI:95623



TATA-Box annotation


Distance to TSS:184
Nearest PromoterID:NM_001362655
Entrez ID:14406
Nearest Unigene:Mm.5309
Nearest Refseq:NM_008073
Nearest Ensembl:ENSMUSG00000020436
Gene Name:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene Alias:GABAA-R|Gabrg-2|gamma2
Gene Description:gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Gene Type:protein-coding
CpG%:0.02
GC%:0.447761
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):