Difference between revisions of "TSS:Mm 101708.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=M62374:-2 AK034338:-8 NM_008073:-38 NM_177408:-38 uc007imb.2:-38 uc007imc.3:-38 uc007imd.2:-38 uc007ime.2:-38 ENSMUST00000070735.9:138 BC031762:138 M865...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Gabrg-2= |
| + | |all_trans=MGI:95623 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-2 | |distance=-2 | ||
| − | |distance_to_tss= | + | |distance_to_tss=184 |
|end=42000676 | |end=42000676 | ||
| + | |end_of_center_position=42000673 | ||
|entrez_id=14406 | |entrez_id=14406 | ||
| + | |gamma2= | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=GABAA-R | + | |gene_alias=GABAA-R{{!}}Gabrg-2{{!}}gamma2 |
| − | |gene_description= | + | |gene_description=gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 |
|gene_id=14406 | |gene_id=14406 | ||
| − | |gene_name= | + | |gene_name=gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 |
|gene_source=MGI:95623 | |gene_source=MGI:95623 | ||
|gene_symbol=Gabrg2 | |gene_symbol=Gabrg2 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=MGI:95623 | |hgnc_mgi_id=MGI:95623 | ||
|nearest_ensembl=ENSMUSG00000020436 | |nearest_ensembl=ENSMUSG00000020436 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362655 |
|nearest_refseq=NM_008073 | |nearest_refseq=NM_008073 | ||
|nearest_unigene=Mm.5309 | |nearest_unigene=Mm.5309 | ||
| − | |num_trans= | + | |num_trans=14406 |
|species=mouse | |species=mouse | ||
|start=42000669 | |start=42000669 | ||
| + | |start_of_center_position=42000672 | ||
|strand=- | |strand=- | ||
|transcript_name=M62374 | |transcript_name=M62374 | ||
Latest revision as of 11:06, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 42000672 |
|---|---|
| End of the center position in the TSS region: | 42000673 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | M62374 |
|---|---|
| Distance: | -2 |
| Num_trans: | 14406 |
| All_trans: | MGI:95623 |
TATA-Box annotation
| Distance to TSS: | 184 |
|---|---|
| Nearest PromoterID: | NM_001362655 |
| Entrez ID: | 14406 |
| Nearest Unigene: | Mm.5309 |
| Nearest Refseq: | NM_008073 |
| Nearest Ensembl: | ENSMUSG00000020436 |
| Gene Name: | gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 |
| Gene Alias: | GABAA-R|Gabrg-2|gamma2 |
| Gene Description: | gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
