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Difference between revisions of "TSS:Mm 101714.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000206105.1:-160 ENSMUST00000153147.2:-273
+
|all_trans=MGI:95613
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 22: Line 22:
 
|nearest_refseq=NM_010250
 
|nearest_refseq=NM_010250
 
|nearest_unigene=Mm.439668
 
|nearest_unigene=Mm.439668
|num_trans=2
+
|num_trans=14394
 
|species=mouse
 
|species=mouse
 
|start=42179654
 
|start=42179654

Latest revision as of 11:06, 26 July 2021

Basic information about the TSS


TSS ID:mm_101714.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:42179654
End:42179683
Strand:-
TSS Score:1
Start of the center position in the TSS region:42179668
End of the center position in the TSS region:42179669



Gene and protein annotation


Transcript_name:ENSMUST00000206105.1
Distance:-160
GeneID:14394
HGNC/MGI_ID:MGI:95613
UniProt_ID:A0A0U1RPE4
Gene_name:gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
Gene_symbol:Gabra1
Gene_synonyms:GABAAR_alpha1 GABAA_alpha_1 Gabra-1
Gene_source:MGI:95613



Transcript annotation


Transcript_name:ENSMUST00000206105.1
Distance:-160
Num_trans:14394
All_trans:MGI:95613



TATA-Box annotation


Distance to TSS:2529
Nearest PromoterID:NM_001359035
Entrez ID:14394
Nearest Unigene:Mm.439668
Nearest Refseq:NM_010250
Nearest Ensembl:ENSMUSG00000010803
Gene Name:gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
Gene Alias:GABAA-alpha1|GABAAR-alpha1|Gabra-1
Gene Description:gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
Gene Type:protein-coding
CpG%:0.015
GC%:0.472637
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):