Difference between revisions of "TSS:Mm 101736.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3649954 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 9: | Line 9: | ||
|entrez_id=387164 | |entrez_id=387164 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=Mirn146 | + | |gene_alias=Mirn146{{!}}miR-146a{{!}}mmu-mir-146 |
|gene_description=microRNA 146 | |gene_description=microRNA 146 | ||
|gene_id= | |gene_id= | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NR_029558 | |nearest_refseq=NR_029558 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=43311135 | |start=43311135 | ||
|start_of_center_position=43311140 | |start_of_center_position=43311140 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=43(GCTTTAAAACAA,+,0.00) |
|transcript_name=ENSMUST00000144024.1 | |transcript_name=ENSMUST00000144024.1 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=mm_101736.1 | |tss_id=mm_101736.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:06, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 43311140 |
|---|---|
| End of the center position in the TSS region: | 43311141 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000144024.1 |
|---|---|
| Distance: | 48 |
| Num_trans: | |
| All_trans: | MGI:3649954 |
TATA-Box annotation
| Distance to TSS: | 63321 |
|---|---|
| Nearest PromoterID: | NR_029558 |
| Entrez ID: | 387164 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_029558 |
| Nearest Ensembl: | ENSMUSG00000065601 |
| Gene Name: | predicted gene 12147 |
| Gene Alias: | Mirn146|miR-146a|mmu-mir-146 |
| Gene Description: | microRNA 146 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 43(GCTTTAAAACAA,+,0.00) |
