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Difference between revisions of "TSS:Mm 101786.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000131182.1:-46 BC092541:-46 AK017532:-48 BC115560:-54 BC115561:-54 ENSMUST00000011398.12:-57 AK010876:-57 NM_001080969:-66 uc007inv.2:-66 ENSMUST00000109254.1:239 NM_001290737:239 uc007inu.2:239 uc007inw.1:239 AK016076:239 ENSMUST00000133851.1:270 AK007233:270
+
|all_trans=MGI:1913878
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.06
 
|cpg_percent=0.06
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|nearest_refseq=NM_001080969
 
|nearest_refseq=NM_001080969
 
|nearest_unigene=Mm.269083
 
|nearest_unigene=Mm.269083
|num_trans=16
+
|num_trans=66628
 
|species=mouse
 
|species=mouse
 
|start=45955426
 
|start=45955426

Latest revision as of 11:07, 26 July 2021

Basic information about the TSS


TSS ID:mm_101786.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:45955426
End:45955437
Strand:-
TSS Score:1
Start of the center position in the TSS region:45955431
End of the center position in the TSS region:45955432



Gene and protein annotation


Transcript_name:ENSMUST00000131182.1 BC092541
Distance:-46
GeneID:66628
HGNC/MGI_ID:MGI:1913878
UniProt_ID:
Gene_name:tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
Gene_symbol:Thg1l
Gene_synonyms:1700121M19Rik 5730409G07Rik
Gene_source:MGI:1913878



Transcript annotation


Transcript_name:ENSMUST00000131182.1 BC092541
Distance:-46
Num_trans:66628
All_trans:MGI:1913878



TATA-Box annotation


Distance to TSS:71
Nearest PromoterID:NM_001080969
Entrez ID:66628
Nearest Unigene:Mm.269083
Nearest Refseq:NM_001080969
Nearest Ensembl:ENSMUSG00000011254
Gene Name:tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
Gene Alias:-
Gene Description:tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
Gene Type:protein-coding
CpG%:0.06
GC%:0.557214
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):