Difference between revisions of "TSS:Mm 10179.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000118297.1:6 |chr=chr2 |cpg_percent=0.015 |distance=6 |distance_to_tss=-17604 |end=4700232 |entrez_id=209645 |gc_percent=0.482587 |gene_alias=...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |E130319B15Rik= |
| + | |all_trans=MGI:3651918 | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-17604 | |distance_to_tss=-17604 | ||
|end=4700232 | |end=4700232 | ||
| + | |end_of_center_position=4700227 | ||
|entrez_id=209645 | |entrez_id=209645 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| − | |gene_alias=1110017O21Rik | + | |gene_alias=1110017O21Rik{{!}}E130319B15Rik |
|gene_description=BEN domain containing 7 | |gene_description=BEN domain containing 7 | ||
|gene_id= | |gene_id= | ||
| Line 18: | Line 20: | ||
|hgnc_mgi_id=MGI:3651918 | |hgnc_mgi_id=MGI:3651918 | ||
|nearest_ensembl=ENSMUSG00000048186 | |nearest_ensembl=ENSMUSG00000048186 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_178663 |
|nearest_refseq=NM_178663 | |nearest_refseq=NM_178663 | ||
|nearest_unigene=Mm.149539 | |nearest_unigene=Mm.149539 | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=4700221 | |start=4700221 | ||
| + | |start_of_center_position=4700226 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000118297.1 | |transcript_name=ENSMUST00000118297.1 | ||
Latest revision as of 11:08, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 4700226 |
|---|---|
| End of the center position in the TSS region: | 4700227 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000118297.1 |
|---|---|
| Distance: | 6 |
| Num_trans: | |
| All_trans: | MGI:3651918 |
TATA-Box annotation
| Distance to TSS: | -17604 |
|---|---|
| Nearest PromoterID: | NM_178663 |
| Entrez ID: | 209645 |
| Nearest Unigene: | Mm.149539 |
| Nearest Refseq: | NM_178663 |
| Nearest Ensembl: | ENSMUSG00000048186 |
| Gene Name: | predicted gene 13196 |
| Gene Alias: | 1110017O21Rik|E130319B15Rik |
| Gene Description: | BEN domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
