Difference between revisions of "TSS:Mm 101796.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1924134 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-1 | |distance=-1 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-14152 |
|end=46221409 | |end=46221409 | ||
|end_of_center_position=46221405 | |end_of_center_position=46221405 | ||
| − | |entrez_id= | + | |entrez_id=320116 |
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias= | + | |gene_alias=C030019I05Rik |
| − | |gene_description= | + | |gene_description=fibronectin type III domain containing 9 |
|gene_id=76884 | |gene_id=76884 | ||
|gene_name=cytoplasmic FMR1 interacting protein 2 | |gene_name=cytoplasmic FMR1 interacting protein 2 | ||
| Line 16: | Line 16: | ||
|gene_symbol=Cyfip2 | |gene_symbol=Cyfip2 | ||
|gene_synonyms=1500004I01Rik 6430511D02Rik Pir121 | |gene_synonyms=1500004I01Rik 6430511D02Rik Pir121 | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=MGI:1924134 | |hgnc_mgi_id=MGI:1924134 | ||
|mmu-mir-6989= | |mmu-mir-6989= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSMUSG00000048721 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_177075 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_177075 |
| − | |nearest_unigene= | + | |nearest_unigene=Mm.39600 |
| − | |num_trans= | + | |num_trans=76884 |
|species=mouse | |species=mouse | ||
|start=46221400 | |start=46221400 | ||
Latest revision as of 11:08, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 46221404 |
|---|---|
| End of the center position in the TSS region: | 46221405 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC049232 |
|---|---|
| Distance: | -1 |
| Num_trans: | 76884 |
| All_trans: | MGI:1924134 |
TATA-Box annotation
| Distance to TSS: | -14152 |
|---|---|
| Nearest PromoterID: | NM_177075 |
| Entrez ID: | 320116 |
| Nearest Unigene: | Mm.39600 |
| Nearest Refseq: | NM_177075 |
| Nearest Ensembl: | ENSMUSG00000048721 |
| Gene Name: | cytoplasmic FMR1 interacting protein 2 |
| Gene Alias: | C030019I05Rik |
| Gene Description: | fibronectin type III domain containing 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
