Difference between revisions of "TSS:Mm 101800.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC038080:19 |chr=chr11 |cpg_percent=0.03 |distance=19 |distance_to_tss=18447 |end=46254009 |entrez_id=320116 |gc_percent=0.512438 |gene_alias=C030019I05...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1924134 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=18447 | |distance_to_tss=18447 | ||
|end=46254009 | |end=46254009 | ||
| + | |end_of_center_position=46254005 | ||
|entrez_id=320116 | |entrez_id=320116 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_177075 | |nearest_refseq=NM_177075 | ||
|nearest_unigene=Mm.39600 | |nearest_unigene=Mm.39600 | ||
| − | |num_trans= | + | |num_trans=76884 |
|species=mouse | |species=mouse | ||
|start=46253999 | |start=46253999 | ||
| + | |start_of_center_position=46254004 | ||
|strand=- | |strand=- | ||
|transcript_name=BC038080 | |transcript_name=BC038080 | ||
Latest revision as of 11:08, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 46254004 |
|---|---|
| End of the center position in the TSS region: | 46254005 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC038080 |
|---|---|
| Distance: | 19 |
| Num_trans: | 76884 |
| All_trans: | MGI:1924134 |
TATA-Box annotation
| Distance to TSS: | 18447 |
|---|---|
| Nearest PromoterID: | NM_177075 |
| Entrez ID: | 320116 |
| Nearest Unigene: | Mm.39600 |
| Nearest Refseq: | NM_177075 |
| Nearest Ensembl: | ENSMUSG00000048721 |
| Gene Name: | cytoplasmic FMR1 interacting protein 2 |
| Gene Alias: | C030019I05Rik |
| Gene Description: | fibronectin type III domain containing 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
