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Difference between revisions of "TSS:Mm 101805.1"

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|AU022376=
 
|AU022376=
 
|Pir121=
 
|Pir121=
|all_trans=ENSMUST00000093166.10:0 AK147971:0 AF334144:0 AK030397:0 BC056974:0 AK018280:6 AK147586:-12 ENSMUST00000165599.8:-20 NM_001252460:-20 NM_133769:-20 uc007ioc.2:-20 uc007iob.2:-20 ENSMUST00000129474.1:64 AK147632:285
+
|all_trans=MGI:1924134
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.145
 
|cpg_percent=0.145
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|entrez_id=76884
 
|entrez_id=76884
 
|gc_percent=0.80597
 
|gc_percent=0.80597
|gene_alias=1500004I01Rik
+
|gene_alias=1500004I01Rik{{!}}6430511D02Rik{{!}}AA930218{{!}}AU022376{{!}}Pir121{{!}}mKIAA1168
 
|gene_description=cytoplasmic FMR1 interacting protein 2
 
|gene_description=cytoplasmic FMR1 interacting protein 2
 
|gene_id=76884
 
|gene_id=76884
Line 24: Line 24:
 
|mKIAA1168=
 
|mKIAA1168=
 
|nearest_ensembl=ENSMUSG00000020340
 
|nearest_ensembl=ENSMUSG00000020340
|nearest_promoter_id=NM_001252460
+
|nearest_promoter_id=NM_133769
 
|nearest_refseq=NM_133769
 
|nearest_refseq=NM_133769
 
|nearest_unigene=Mm.154358
 
|nearest_unigene=Mm.154358
|num_trans=14
+
|num_trans=76884
 
|species=mouse
 
|species=mouse
 
|start=46312283
 
|start=46312283

Latest revision as of 11:08, 26 July 2021

Basic information about the TSS


TSS ID:mm_101805.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:46312283
End:46312338
Strand:-
TSS Score:1
Start of the center position in the TSS region:46312310
End of the center position in the TSS region:46312311



Gene and protein annotation


Transcript_name:ENSMUST00000093166.10 AK147971 AF334144 AK030397 BC056974
Distance:0
GeneID:76884
HGNC/MGI_ID:MGI:1924134
UniProt_ID:Q5SQX6 Q6PGK0
Gene_name:cytoplasmic FMR1 interacting protein 2
Gene_symbol:Cyfip2
Gene_synonyms:1500004I01Rik 6430511D02Rik Pir121
Gene_source:MGI:1924134



Transcript annotation


Transcript_name:ENSMUST00000093166.10 AK147971 AF334144 AK030397 BC056974
Distance:0
Num_trans:76884
All_trans:MGI:1924134



TATA-Box annotation


Distance to TSS:47
Nearest PromoterID:NM_133769
Entrez ID:76884
Nearest Unigene:Mm.154358
Nearest Refseq:NM_133769
Nearest Ensembl:ENSMUSG00000020340
Gene Name:cytoplasmic FMR1 interacting protein 2
Gene Alias:1500004I01Rik|6430511D02Rik|AA930218|AU022376|Pir121|mKIAA1168
Gene Description:cytoplasmic FMR1 interacting protein 2
Gene Type:protein-coding
CpG%:0.145
GC%:0.80597
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):