Difference between revisions of "TSS:Mm 108898.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000146364.7:250 NR_045282:250 uc007osp.1:250 AK141725:250 |chr=chr12 |cpg_percent=0.07 |distance=250 |distance_to_tss=-271 |end=100187718 |entr...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3642010 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-271 | |distance_to_tss=-271 | ||
|end=100187718 | |end=100187718 | ||
| + | |end_of_center_position=100187698 | ||
|entrez_id=100038378 | |entrez_id=100038378 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 10433 | |gene_description=predicted gene 10433 | ||
|gene_id=100038378 | |gene_id=100038378 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_045282 | |nearest_refseq=NR_045282 | ||
|nearest_unigene=Mm.387075 | |nearest_unigene=Mm.387075 | ||
| − | |num_trans= | + | |num_trans=100038378 |
|species=mouse | |species=mouse | ||
|start=100187676 | |start=100187676 | ||
| + | |start_of_center_position=100187697 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000146364.7 | + | |transcript_name=ENSMUST00000146364.7 AK141725 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_108898.1 | |tss_id=mm_108898.1 | ||
Latest revision as of 13:44, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 100187697 |
|---|---|
| End of the center position in the TSS region: | 100187698 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000146364.7 AK141725 |
|---|---|
| Distance: | 250 |
| Num_trans: | 100038378 |
| All_trans: | MGI:3642010 |
TATA-Box annotation
| Distance to TSS: | -271 |
|---|---|
| Nearest PromoterID: | NR_045282 |
| Entrez ID: | 100038378 |
| Nearest Unigene: | Mm.387075 |
| Nearest Refseq: | NR_045282 |
| Nearest Ensembl: | ENSMUSG00000072884 |
| Gene Name: | predicted gene 10433 |
| Gene Alias: | - |
| Gene Description: | predicted gene 10433 |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
