Difference between revisions of "TSS:Mm 109824.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|Gm10485= | |Gm10485= | ||
| − | |all_trans= | + | |all_trans=MGI:3641689 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 10: | Line 10: | ||
|entrez_id=100038522 | |entrez_id=100038522 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias= | + | |gene_alias=Gm10485 |
| − | |gene_description= | + | |gene_description=DNA methyltransferase 3A, opposite strand |
|gene_id=100038522 | |gene_id=100038522 | ||
| − | |gene_name= | + | |gene_name=DNA methyltransferase 3A, opposite strand |
|gene_source=MGI:3641689 | |gene_source=MGI:3641689 | ||
|gene_symbol=Dnmt3aos | |gene_symbol=Dnmt3aos | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NR_045884 | |nearest_refseq=NR_045884 | ||
|nearest_unigene=Mm.417270 | |nearest_unigene=Mm.417270 | ||
| − | |num_trans= | + | |num_trans=100038522 |
|species=mouse | |species=mouse | ||
|start=3862305 | |start=3862305 | ||
|start_of_center_position=3862310 | |start_of_center_position=3862310 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000144896 | + | |transcript_name=ENSMUST00000144896.1 AK150533 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_109824.1 | |tss_id=mm_109824.1 | ||
Latest revision as of 14:05, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3862310 |
|---|---|
| End of the center position in the TSS region: | 3862311 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000144896.1 AK150533 |
|---|---|
| Distance: | 62 |
| Num_trans: | 100038522 |
| All_trans: | MGI:3641689 |
TATA-Box annotation
| Distance to TSS: | -67 |
|---|---|
| Nearest PromoterID: | NR_045884 |
| Entrez ID: | 100038522 |
| Nearest Unigene: | Mm.417270 |
| Nearest Refseq: | NR_045884 |
| Nearest Ensembl: | ENSMUSG00000073242 |
| Gene Name: | DNA methyltransferase 3A, opposite strand |
| Gene Alias: | Gm10485 |
| Gene Description: | DNA methyltransferase 3A, opposite strand |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
