Difference between revisions of "TSS:Mm 113629.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3641845 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 9: | Line 9: | ||
|entrez_id=100038577 | |entrez_id=100038577 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 10790 | |gene_description=predicted gene 10790 | ||
|gene_id=100038577 | |gene_id=100038577 | ||
| Line 18: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:3641845 | |hgnc_mgi_id=MGI:3641845 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSMUSG00000113856 |
|nearest_promoter_id=NR_033545 | |nearest_promoter_id=NR_033545 | ||
|nearest_refseq=NR_033545 | |nearest_refseq=NR_033545 | ||
|nearest_unigene=Mm.387093 | |nearest_unigene=Mm.387093 | ||
| − | |num_trans= | + | |num_trans=100038577 |
|species=mouse | |species=mouse | ||
|start=41865931 | |start=41865931 | ||
|start_of_center_position=41865938 | |start_of_center_position=41865938 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK079020 | + | |transcript_name=ENSMUST00000221085.1 AK079020 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_113629.1 | |tss_id=mm_113629.1 | ||
Latest revision as of 15:28, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 41865938 |
|---|---|
| End of the center position in the TSS region: | 41865939 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000221085.1 AK079020 |
|---|---|
| Distance: | -16 |
| Num_trans: | 100038577 |
| All_trans: | MGI:3641845 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NR_033545 |
| Entrez ID: | 100038577 |
| Nearest Unigene: | Mm.387093 |
| Nearest Refseq: | NR_033545 |
| Nearest Ensembl: | ENSMUSG00000113856 |
| Gene Name: | predicted gene 10790 |
| Gene Alias: | - |
| Gene Description: | predicted gene 10790 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
