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Difference between revisions of "TSS:Mm 123919.1"

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Line 5: Line 5:
 
|D14Sel6=
 
|D14Sel6=
 
|E25BMM=
 
|E25BMM=
|all_trans=AK008861:14 LF241976:-25 MA477553:-25 AK200695:-44 AK210559:-46 LF241977:-96 MA477554:-96 LF200073:-116 MA435650:-116
+
|all_trans=MGI:1309517
 
|chr=chr14
 
|chr=chr14
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 28: Line 28:
 
|nearest_refseq=NM_008410
 
|nearest_refseq=NM_008410
 
|nearest_unigene=Mm.4266
 
|nearest_unigene=Mm.4266
|num_trans=9
+
|num_trans=16432
 
|species=mouse
 
|species=mouse
 
|start=73364568
 
|start=73364568

Latest revision as of 19:13, 26 July 2021

Basic information about the TSS


TSS ID:mm_123919.1
Species:mouse
Chr:chr14
TSS Classification:yes
Start:73364568
End:73364578
Strand:-
TSS Score:1
Start of the center position in the TSS region:73364573
End of the center position in the TSS region:73364574



Gene and protein annotation


Transcript_name:AK008861
Distance:14
GeneID:16432
HGNC/MGI_ID:MGI:1309517
UniProt_ID:Q9CVA8
Gene_name:integral membrane protein 2B
Gene_symbol:Itm2b
Gene_synonyms:Bri2 Bricd2b D14Sel6
Gene_source:MGI:1309517



Transcript annotation


Transcript_name:AK008861
Distance:14
Num_trans:16432
All_trans:MGI:1309517



TATA-Box annotation


Distance to TSS:20716
Nearest PromoterID:NM_008410
Entrez ID:16432
Nearest Unigene:Mm.4266
Nearest Refseq:NM_008410
Nearest Ensembl:ENSMUSG00000022108
Gene Name:integral membrane protein 2B
Gene Alias:AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2
Gene Description:integral membrane protein 2B
Gene Type:protein-coding
CpG%:0.045
GC%:0.512438
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):