Difference between revisions of "TSS:Mm 123933.1"
From referenceTSS
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| Line 5: | Line 5: | ||
|D14Sel6= | |D14Sel6= | ||
|E25BMM= | |E25BMM= | ||
| − | |all_trans= | + | |all_trans=MGI:1309517 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=232 | |distance=232 | ||
| − | |distance_to_tss= | + | |distance_to_tss=18571 |
|end=73366722 | |end=73366722 | ||
|end_of_center_position=73366719 | |end_of_center_position=73366719 | ||
|entrez_id=16432 | |entrez_id=16432 | ||
|gc_percent=0.358209 | |gc_percent=0.358209 | ||
| − | |gene_alias=AI256040 | + | |gene_alias=AI256040{{!}}Bri{{!}}Bri2{{!}}Bricd2b{{!}}D14Sel6{{!}}E25BMM{{!}}imBRI2 |
|gene_description=integral membrane protein 2B | |gene_description=integral membrane protein 2B | ||
|gene_id=16432 | |gene_id=16432 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_008410 | |nearest_refseq=NM_008410 | ||
|nearest_unigene=Mm.4266 | |nearest_unigene=Mm.4266 | ||
| − | |num_trans= | + | |num_trans=16432 |
|species=mouse | |species=mouse | ||
|start=73366714 | |start=73366714 | ||
|start_of_center_position=73366718 | |start_of_center_position=73366718 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-7(TTTTTTAAAGAC,+,0.00) |
| − | |transcript_name= | + | |transcript_name=AK204304 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_123933.1 | |tss_id=mm_123933.1 | ||
Latest revision as of 19:13, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73366718 |
|---|---|
| End of the center position in the TSS region: | 73366719 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK204304 |
|---|---|
| Distance: | 232 |
| Num_trans: | 16432 |
| All_trans: | MGI:1309517 |
TATA-Box annotation
| Distance to TSS: | 18571 |
|---|---|
| Nearest PromoterID: | NM_008410 |
| Entrez ID: | 16432 |
| Nearest Unigene: | Mm.4266 |
| Nearest Refseq: | NM_008410 |
| Nearest Ensembl: | ENSMUSG00000022108 |
| Gene Name: | integral membrane protein 2B |
| Gene Alias: | AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 |
| Gene Description: | integral membrane protein 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.358209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -7(TTTTTTAAAGAC,+,0.00) |
