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Difference between revisions of "TSS:Mm 123938.1"

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Line 5: Line 5:
 
|D14Sel6=
 
|D14Sel6=
 
|E25BMM=
 
|E25BMM=
|all_trans=AK197360:0 AK198503:3 ENSMUST00000226722.1:-77 AB030204:-77
+
|all_trans=MGI:1309517
 
|chr=chr14
 
|chr=chr14
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 28: Line 28:
 
|nearest_refseq=NM_008410
 
|nearest_refseq=NM_008410
 
|nearest_unigene=Mm.4266
 
|nearest_unigene=Mm.4266
|num_trans=4
+
|num_trans=16432
 
|species=mouse
 
|species=mouse
 
|start=73368410
 
|start=73368410

Latest revision as of 19:13, 26 July 2021

Basic information about the TSS


TSS ID:mm_123938.1
Species:mouse
Chr:chr14
TSS Classification:yes
Start:73368410
End:73368428
Strand:-
TSS Score:1
Start of the center position in the TSS region:73368419
End of the center position in the TSS region:73368420



Gene and protein annotation


Transcript_name:AK197360
Distance:0
GeneID:16432
HGNC/MGI_ID:MGI:1309517
UniProt_ID:
Gene_name:integral membrane protein 2B
Gene_symbol:Itm2b
Gene_synonyms:Bri2 Bricd2b D14Sel6
Gene_source:MGI:1309517



Transcript annotation


Transcript_name:AK197360
Distance:0
Num_trans:16432
All_trans:MGI:1309517



TATA-Box annotation


Distance to TSS:16870
Nearest PromoterID:NM_008410
Entrez ID:16432
Nearest Unigene:Mm.4266
Nearest Refseq:NM_008410
Nearest Ensembl:ENSMUSG00000022108
Gene Name:integral membrane protein 2B
Gene Alias:AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2
Gene Description:integral membrane protein 2B
Gene Type:protein-coding
CpG%:0.045
GC%:0.542289
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):