Difference between revisions of "TSS:Mm 123942.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 5: | Line 5: | ||
|D14Sel6= | |D14Sel6= | ||
|E25BMM= | |E25BMM= | ||
| − | |all_trans= | + | |all_trans=MGI:1309517 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_008410 | |nearest_refseq=NM_008410 | ||
|nearest_unigene=Mm.4266 | |nearest_unigene=Mm.4266 | ||
| − | |num_trans= | + | |num_trans=16432 |
|species=mouse | |species=mouse | ||
|start=73375999 | |start=73375999 | ||
| Line 34: | Line 34: | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000227454.1 | |transcript_name=ENSMUST00000227454.1 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_123942.1 | |tss_id=mm_123942.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A2I3BPW7 | |uniprot_id=A0A2I3BPW7 | ||
}} | }} | ||
Latest revision as of 19:13, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 73376004 |
|---|---|
| End of the center position in the TSS region: | 73376005 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000227454.1 |
|---|---|
| Distance: | 55 |
| Num_trans: | 16432 |
| All_trans: | MGI:1309517 |
TATA-Box annotation
| Distance to TSS: | 9284 |
|---|---|
| Nearest PromoterID: | NM_008410 |
| Entrez ID: | 16432 |
| Nearest Unigene: | Mm.4266 |
| Nearest Refseq: | NM_008410 |
| Nearest Ensembl: | ENSMUSG00000022108 |
| Gene Name: | integral membrane protein 2B |
| Gene Alias: | AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 |
| Gene Description: | integral membrane protein 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
