Difference between revisions of "TSS:Mm 140547.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3630308 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=40 | |distance_to_tss=40 | ||
|end=6948349 | |end=6948349 | ||
| + | |end_of_center_position=6948317 | ||
|entrez_id=100037282 | |entrez_id=100037282 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001083945 | |nearest_refseq=NM_001083945 | ||
|nearest_unigene=Mm.29830 | |nearest_unigene=Mm.29830 | ||
| − | |num_trans= | + | |num_trans=100037282 |
|species=mouse | |species=mouse | ||
|start=6948283 | |start=6948283 | ||
| + | |start_of_center_position=6948316 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK016473 AK161285 | + | |transcript_name=AK016473 AK161285 AK177506 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_140547.1 | |tss_id=mm_140547.1 | ||
Latest revision as of 01:18, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6948316 |
|---|---|
| End of the center position in the TSS region: | 6948317 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK016473 AK161285 AK177506 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100037282 |
| All_trans: | MGI:3630308 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_001083945 |
| Entrez ID: | 100037282 |
| Nearest Unigene: | Mm.29830 |
| Nearest Refseq: | NM_001083945 |
| Nearest Ensembl: | ENSMUSG00000023806 |
| Gene Name: | radial spoke 3B homolog (Chlamydomonas) |
| Gene Alias: | Rshl2b |
| Gene Description: | radial spoke 3B homolog (Chlamydomonas) |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
