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Difference between revisions of "TSS:Mm 155767.1"

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Line 2: Line 2:
 
|Gm14924=
 
|Gm14924=
 
|OTTMUSG00000018496=
 
|OTTMUSG00000018496=
|all_trans=AK170206:0 ENSMUST00000133125.2:-10 NR_030718:-10 ENSMUST00000147681.1:18 AK036748:18
+
|all_trans=MGI:3641813
 
|chr=chrX
 
|chr=chrX
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 25: Line 25:
 
|nearest_refseq=NR_030718
 
|nearest_refseq=NR_030718
 
|nearest_unigene=Mm.30815
 
|nearest_unigene=Mm.30815
|num_trans=5
+
|num_trans=100038363
 
|species=mouse
 
|species=mouse
 
|start=96239935
 
|start=96239935

Latest revision as of 06:56, 27 July 2021

Basic information about the TSS


TSS ID:mm_155767.1
Species:mouse
Chr:chrX
TSS Classification:no
Start:96239935
End:96239948
Strand:+
TSS Score:1
Start of the center position in the TSS region:96239941
End of the center position in the TSS region:96239942



Gene and protein annotation


Transcript_name:AK170206
Distance:0
GeneID:100038363
HGNC/MGI_ID:MGI:3641813
UniProt_ID:Q3TDG6
Gene_name:RIKEN cDNA F630028O10 gene
Gene_symbol:F630028O10Rik
Gene_synonyms:ENSMUSG00000065522 Gm14924 lnc15847
Gene_source:MGI:3641813



Transcript annotation


Transcript_name:AK170206
Distance:0
Num_trans:100038363
All_trans:MGI:3641813



TATA-Box annotation


Distance to TSS:16
Nearest PromoterID:NR_030718
Entrez ID:100038363
Nearest Unigene:Mm.30815
Nearest Refseq:NR_030718
Nearest Ensembl:ENSMUSG00000078122
Gene Name:RIKEN cDNA F630028O10 gene
Gene Alias:Gm14924|mir-223
Gene Description:RIKEN cDNA F630028O10 gene
Gene Type:ncRNA
CpG%:0.005
GC%:0.437811
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):