Difference between revisions of "TSS:Mm 160804.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3603030 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=34 | |distance_to_tss=34 | ||
|end=6606020 | |end=6606020 | ||
| + | |end_of_center_position=6606020 | ||
|entrez_id=192950 | |entrez_id=192950 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=D230024G13Rik | + | |gene_alias=D230024G13Rik{{!}}mKIAA0363 |
|gene_description=NAC alpha domain containing | |gene_description=NAC alpha domain containing | ||
|gene_id=192950 | |gene_id=192950 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3603030 | |hgnc_mgi_id=MGI:3603030 | ||
| + | |mKIAA0363= | ||
|nearest_ensembl=ENSMUSG00000041073 | |nearest_ensembl=ENSMUSG00000041073 | ||
|nearest_promoter_id=NM_001081652 | |nearest_promoter_id=NM_001081652 | ||
|nearest_refseq=NM_001081652 | |nearest_refseq=NM_001081652 | ||
|nearest_unigene=Mm.337771 | |nearest_unigene=Mm.337771 | ||
| − | |num_trans= | + | |num_trans=192950 |
|species=mouse | |species=mouse | ||
|start=6606019 | |start=6606019 | ||
| + | |start_of_center_position=6606019 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000045713.3 | |transcript_name=ENSMUST00000045713.3 | ||
Latest revision as of 08:47, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6606019 |
|---|---|
| End of the center position in the TSS region: | 6606020 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000045713.3 |
|---|---|
| Distance: | -33 |
| Num_trans: | 192950 |
| All_trans: | MGI:3603030 |
TATA-Box annotation
| Distance to TSS: | 34 |
|---|---|
| Nearest PromoterID: | NM_001081652 |
| Entrez ID: | 192950 |
| Nearest Unigene: | Mm.337771 |
| Nearest Refseq: | NM_001081652 |
| Nearest Ensembl: | ENSMUSG00000041073 |
| Gene Name: | NAC alpha domain containing |
| Gene Alias: | D230024G13Rik|mKIAA0363 |
| Gene Description: | NAC alpha domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
