Difference between revisions of "TSS:Mm 161910.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Gm10534= |
| + | |Spink5l3= | ||
| + | |all_trans=MGI:3642511 | ||
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=15 | |distance_to_tss=15 | ||
|end=62741372 | |end=62741372 | ||
| + | |end_of_center_position=62741372 | ||
|entrez_id=100038417 | |entrez_id=100038417 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias= | + | |gene_alias=Gm10534{{!}}Spink5l3 |
| − | |gene_description= | + | |gene_description=serine peptidase inhibitor, Kazal type 13 |
|gene_id=100038417 | |gene_id=100038417 | ||
| − | |gene_name= | + | |gene_name=serine peptidase inhibitor, Kazal type 13 |
|gene_source=MGI:3642511 | |gene_source=MGI:3642511 | ||
|gene_symbol=Spink13 | |gene_symbol=Spink13 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_001168423 | |nearest_refseq=NM_001168423 | ||
|nearest_unigene=Mm.387557 | |nearest_unigene=Mm.387557 | ||
| − | |num_trans= | + | |num_trans=100038417 |
|species=mouse | |species=mouse | ||
|start=62741371 | |start=62741371 | ||
| + | |start_of_center_position=62741371 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000097557.4 | + | |transcript_name=ENSMUST00000097557.4 AK139149 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_161910.1 | |tss_id=mm_161910.1 | ||
Latest revision as of 09:11, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 62741371 |
|---|---|
| End of the center position in the TSS region: | 62741372 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000097557.4 AK139149 |
|---|---|
| Distance: | -15 |
| Num_trans: | 100038417 |
| All_trans: | MGI:3642511 |
TATA-Box annotation
| Distance to TSS: | 15 |
|---|---|
| Nearest PromoterID: | NM_001168423 |
| Entrez ID: | 100038417 |
| Nearest Unigene: | Mm.387557 |
| Nearest Refseq: | NM_001168423 |
| Nearest Ensembl: | ENSMUSG00000073551 |
| Gene Name: | serine peptidase inhibitor, Kazal type 13 |
| Gene Alias: | Gm10534|Spink5l3 |
| Gene Description: | serine peptidase inhibitor, Kazal type 13 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
