Difference between revisions of "TSS:Mm 163004.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK220048:-69 ENSMUST00000137815.1:-79 BC020132:-104 AK076160:-120 AK152108:-120 AK166097:-120 AK168194:-120 AK149856:-120 AK160216:-120 ENSMUST000000189...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |2610037E21Rik= |
| + | |AL033339= | ||
| + | |AW985894= | ||
| + | |all_trans=MGI:1914297 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=150 | |distance_to_tss=150 | ||
|end=35834382 | |end=35834382 | ||
| + | |end_of_center_position=35834379 | ||
|entrez_id=104458 | |entrez_id=104458 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=2610011N19Rik | + | |gene_alias=2610011N19Rik{{!}}2610037E21Rik{{!}}AL033339{{!}}AW985894 |
|gene_description=arginyl-tRNA synthetase | |gene_description=arginyl-tRNA synthetase | ||
|gene_id=104458 | |gene_id=104458 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_025936 | |nearest_refseq=NM_025936 | ||
|nearest_unigene=Mm.284906 | |nearest_unigene=Mm.284906 | ||
| − | |num_trans= | + | |num_trans=104458 |
|species=mouse | |species=mouse | ||
|start=35834374 | |start=35834374 | ||
| + | |start_of_center_position=35834378 | ||
|strand=- | |strand=- | ||
|transcript_name=AK220048 | |transcript_name=AK220048 | ||
Latest revision as of 09:35, 27 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 35834378 |
|---|---|
| End of the center position in the TSS region: | 35834379 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK220048 |
|---|---|
| Distance: | -69 |
| Num_trans: | 104458 |
| All_trans: | MGI:1914297 |
TATA-Box annotation
| Distance to TSS: | 150 |
|---|---|
| Nearest PromoterID: | NM_025936 |
| Entrez ID: | 104458 |
| Nearest Unigene: | Mm.284906 |
| Nearest Refseq: | NM_025936 |
| Nearest Ensembl: | ENSMUSG00000018848 |
| Gene Name: | arginyl-tRNA synthetase |
| Gene Alias: | 2610011N19Rik|2610037E21Rik|AL033339|AW985894 |
| Gene Description: | arginyl-tRNA synthetase |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
