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Difference between revisions of "TSS:Mm 163264.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000106621.3:-72 AK017508:-72 ENSMUST00000123466.1:-79 AK139389:-79 NM_177777:-85 NM_001361593:-85 ENSMUST00000042227.14:-107 BC048942:-107 AK171307:-113 AK019727:-495
+
|all_trans=MGI:106356
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 22: Line 22:
 
|nearest_refseq=NM_177777
 
|nearest_refseq=NM_177777
 
|nearest_unigene=Mm.239566
 
|nearest_unigene=Mm.239566
|num_trans=10
+
|num_trans=276852
 
|species=mouse
 
|species=mouse
 
|start=113684518
 
|start=113684518

Latest revision as of 09:40, 27 July 2021

Basic information about the TSS


TSS ID:mm_163264.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:113684518
End:113684525
Strand:+
TSS Score:1
Start of the center position in the TSS region:113684521
End of the center position in the TSS region:113684522



Gene and protein annotation


Transcript_name:ENSMUST00000106621.3 AK017508
Distance:-72
GeneID:276852
HGNC/MGI_ID:MGI:106356
UniProt_ID:Q6PIX9
Gene_name:DNA segment, Chr 11, Wayne State University 47, expressed
Gene_symbol:D11Wsu47e
Gene_synonyms:
Gene_source:MGI:106356



Transcript annotation


Transcript_name:ENSMUST00000106621.3 AK017508
Distance:-72
Num_trans:276852
All_trans:MGI:106356



TATA-Box annotation


Distance to TSS:88
Nearest PromoterID:NM_001361593
Entrez ID:276852
Nearest Unigene:Mm.239566
Nearest Refseq:NM_177777
Nearest Ensembl:ENSMUSG00000041623
Gene Name:DNA segment, Chr 11, Wayne State University 47, expressed
Gene Alias:-
Gene Description:DNA segment, Chr 11, Wayne State University 47, expressed
Gene Type:protein-coding
CpG%:0.09
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):