Difference between revisions of "TSS:Mm 163295.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK162346:-5 ENSMUST00000137055.1:24 AK184598:242 |chr=chr11 |cpg_percent=0.01 |distance=-5 |distance_to_tss=2892 |end=119916707 |entrez_id=208092 |gc_pe...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3583942 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=2892 | |distance_to_tss=2892 | ||
|end=119916707 | |end=119916707 | ||
| + | |end_of_center_position=119916702 | ||
|entrez_id=208092 | |entrez_id=208092 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001085498 | |nearest_refseq=NM_001085498 | ||
|nearest_unigene=Mm.306673 | |nearest_unigene=Mm.306673 | ||
| − | |num_trans= | + | |num_trans=208092 |
|species=mouse | |species=mouse | ||
|start=119916696 | |start=119916696 | ||
| + | |start_of_center_position=119916701 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK162346 | |transcript_name=AK162346 | ||
Latest revision as of 09:41, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119916701 |
|---|---|
| End of the center position in the TSS region: | 119916702 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK162346 |
|---|---|
| Distance: | -5 |
| Num_trans: | 208092 |
| All_trans: | MGI:3583942 |
TATA-Box annotation
| Distance to TSS: | 2892 |
|---|---|
| Nearest PromoterID: | NM_001085498 |
| Entrez ID: | 208092 |
| Nearest Unigene: | Mm.306673 |
| Nearest Refseq: | NM_001085498 |
| Nearest Ensembl: | ENSMUSG00000025371 |
| Gene Name: | charged multivesicular body protein 6 |
| Gene Alias: | 2400004G01Rik |
| Gene Description: | charged multivesicular body protein 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
