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Difference between revisions of "TSS:Mm 163295.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK162346:-5 ENSMUST00000137055.1:24 AK184598:242
+
|all_trans=MGI:3583942
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NM_001085498
 
|nearest_refseq=NM_001085498
 
|nearest_unigene=Mm.306673
 
|nearest_unigene=Mm.306673
|num_trans=3
+
|num_trans=208092
 
|species=mouse
 
|species=mouse
 
|start=119916696
 
|start=119916696

Latest revision as of 09:41, 27 July 2021

Basic information about the TSS


TSS ID:mm_163295.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:119916696
End:119916707
Strand:+
TSS Score:1
Start of the center position in the TSS region:119916701
End of the center position in the TSS region:119916702



Gene and protein annotation


Transcript_name:AK162346
Distance:-5
GeneID:208092
HGNC/MGI_ID:MGI:3583942
UniProt_ID:Q3TS10
Gene_name:charged multivesicular body protein 6
Gene_symbol:Chmp6
Gene_synonyms:2400004G01Rik chromatin_modifying_protein_6
Gene_source:MGI:3583942



Transcript annotation


Transcript_name:AK162346
Distance:-5
Num_trans:208092
All_trans:MGI:3583942



TATA-Box annotation


Distance to TSS:2892
Nearest PromoterID:NM_001085498
Entrez ID:208092
Nearest Unigene:Mm.306673
Nearest Refseq:NM_001085498
Nearest Ensembl:ENSMUSG00000025371
Gene Name:charged multivesicular body protein 6
Gene Alias:2400004G01Rik
Gene Description:charged multivesicular body protein 6
Gene Type:protein-coding
CpG%:0.01
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):