Difference between revisions of "TSS:Mm 163300.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK181676:-1 AK216327:-1 AK209356:-1 AK205770:-1 AK183749:-1 |chr=chr11 |cpg_percent=0.045 |distance=-1 |distance_to_tss=-5005 |end=120479680 |entrez_id=...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |1500031N16Rik= |
| + | |MRP-L12= | ||
| + | |Rpml12= | ||
| + | |all_trans=MGI:104681 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=-1 | |distance=-1 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-4973 |
|end=120479680 | |end=120479680 | ||
| + | |end_of_center_position=120479665 | ||
|entrez_id=56282 | |entrez_id=56282 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=0610034O11Rik | + | |gene_alias=0610034O11Rik{{!}}1500031N16Rik{{!}}L12mt{{!}}MRP-L12{{!}}Rpml12 |
|gene_description=mitochondrial ribosomal protein L12 | |gene_description=mitochondrial ribosomal protein L12 | ||
|gene_id=15239 | |gene_id=15239 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_027204 | |nearest_refseq=NM_027204 | ||
|nearest_unigene=Mm.133851 | |nearest_unigene=Mm.133851 | ||
| − | |num_trans= | + | |num_trans=15239 |
|species=mouse | |species=mouse | ||
|start=120479648 | |start=120479648 | ||
| + | |start_of_center_position=120479664 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK216327 AK209356 AK205770 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_163300.1 | |tss_id=mm_163300.1 | ||
Latest revision as of 09:41, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120479664 |
|---|---|
| End of the center position in the TSS region: | 120479665 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK216327 AK209356 AK205770 |
|---|---|
| Distance: | -1 |
| Num_trans: | 15239 |
| All_trans: | MGI:104681 |
TATA-Box annotation
| Distance to TSS: | -4973 |
|---|---|
| Nearest PromoterID: | NM_027204 |
| Entrez ID: | 56282 |
| Nearest Unigene: | Mm.133851 |
| Nearest Refseq: | NM_027204 |
| Nearest Ensembl: | ENSMUSG00000039640 |
| Gene Name: | HGF-regulated tyrosine kinase substrate |
| Gene Alias: | 0610034O11Rik|1500031N16Rik|L12mt|MRP-L12|Rpml12 |
| Gene Description: | mitochondrial ribosomal protein L12 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
