Difference between revisions of "TSS:Mm 16426.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000069943.3:455 NR_045877:455 uc029ujg.2:455 AK018689:455 |chr=chr2 |cpg_percent=0.05 |distance=455 |distance_to_tss=-461 |end=180332402 |entre...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |OTTMUSG00000016300= |
| + | |all_trans=MGI:3650386 | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-461 | |distance_to_tss=-461 | ||
|end=180332402 | |end=180332402 | ||
| + | |end_of_center_position=180332397 | ||
|entrez_id=100036520 | |entrez_id=100036520 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=Gm14318 | + | |gene_alias=Gm14318 |
| − | |gene_description= | + | |gene_description=GATA binding protein 5, opposite strand |
|gene_id=100036520 | |gene_id=100036520 | ||
| − | |gene_name= | + | |gene_name=GATA binding protein 5, opposite strand |
|gene_source=MGI:3650386 | |gene_source=MGI:3650386 | ||
|gene_symbol=Gata5os | |gene_symbol=Gata5os | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NR_045877 | |nearest_refseq=NR_045877 | ||
|nearest_unigene=Mm.98950 | |nearest_unigene=Mm.98950 | ||
| − | |num_trans= | + | |num_trans=100036520 |
|species=mouse | |species=mouse | ||
|start=180332390 | |start=180332390 | ||
| + | |start_of_center_position=180332396 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000069943.3 | + | |transcript_name=ENSMUST00000069943.3 AK018689 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_16426.1 | |tss_id=mm_16426.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8CEM4 |
}} | }} | ||
Latest revision as of 10:02, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 180332396 |
|---|---|
| End of the center position in the TSS region: | 180332397 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000069943.3 AK018689 |
|---|---|
| Distance: | 455 |
| Num_trans: | 100036520 |
| All_trans: | MGI:3650386 |
TATA-Box annotation
| Distance to TSS: | -461 |
|---|---|
| Nearest PromoterID: | NR_045877 |
| Entrez ID: | 100036520 |
| Nearest Unigene: | Mm.98950 |
| Nearest Refseq: | NR_045877 |
| Nearest Ensembl: | ENSMUSG00000056061 |
| Gene Name: | GATA binding protein 5, opposite strand |
| Gene Alias: | Gm14318 |
| Gene Description: | GATA binding protein 5, opposite strand |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
