Difference between revisions of "TSS:Mm 20144.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001081975:0 uc008lzg.1:0 AK088946:0 AK169029:0 AK018514:0 AK011317:0 ENSMUST00000056732.3:-30 |chr=chr2 |cpg_percent=0.07 |distance=0 |distance_to_ts...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3694697 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=8 | |distance_to_tss=8 | ||
|end=121474037 | |end=121474037 | ||
| + | |end_of_center_position=121474016 | ||
|entrez_id=100034361 | |entrez_id=100034361 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias= | + | |gene_alias=Mfap1a |
|gene_description=microfibrillar-associated protein 1B | |gene_description=microfibrillar-associated protein 1B | ||
|gene_id=100034361 | |gene_id=100034361 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001081975 | |nearest_refseq=NM_001081975 | ||
|nearest_unigene=Mm.270393 | |nearest_unigene=Mm.270393 | ||
| − | |num_trans= | + | |num_trans=100034361 |
|species=mouse | |species=mouse | ||
|start=121473993 | |start=121473993 | ||
| + | |start_of_center_position=121474015 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK088946 AK169029 AK018514 AK011317 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_20144.1 | |tss_id=mm_20144.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=C0HKD9 |
}} | }} | ||
Latest revision as of 14:19, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 121474015 |
|---|---|
| End of the center position in the TSS region: | 121474016 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK088946 AK169029 AK018514 AK011317 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100034361 |
| All_trans: | MGI:3694697 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_001081975 |
| Entrez ID: | 100034361 |
| Nearest Unigene: | Mm.270393 |
| Nearest Refseq: | NM_001081975 |
| Nearest Ensembl: | ENSMUSG00000048222 |
| Gene Name: | microfibrillar-associated protein 1B |
| Gene Alias: | Mfap1a |
| Gene Description: | microfibrillar-associated protein 1B |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
