Difference between revisions of "TSS:Mm 28436.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=J05504:25 ENSMUST00000029540.12:497 NM_008727:497 uc008qcg.1:497 |chr=chr3 |cpg_percent=0.03 |distance=25 |distance_to_tss=-517 |end=90466404 |entrez_id...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |GC-A= |
| + | |NPR-A= | ||
| + | |NPRA= | ||
| + | |Pndr= | ||
| + | |all_trans=MGI:97371 | ||
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-517 | |distance_to_tss=-517 | ||
|end=90466404 | |end=90466404 | ||
| + | |end_of_center_position=90466384 | ||
|entrez_id=18160 | |entrez_id=18160 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=AI893888 | + | |gene_alias=AI893888{{!}}GC-A{{!}}NPR-A{{!}}NPRA{{!}}Pndr |
|gene_description=natriuretic peptide receptor 1 | |gene_description=natriuretic peptide receptor 1 | ||
|gene_id=18160 | |gene_id=18160 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_008727 | |nearest_refseq=NM_008727 | ||
|nearest_unigene=Mm.4627 | |nearest_unigene=Mm.4627 | ||
| − | |num_trans= | + | |num_trans=18160 |
|species=mouse | |species=mouse | ||
|start=90466362 | |start=90466362 | ||
| + | |start_of_center_position=90466383 | ||
|strand=- | |strand=- | ||
|transcript_name=J05504 | |transcript_name=J05504 | ||
Latest revision as of 17:22, 27 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 90466383 |
|---|---|
| End of the center position in the TSS region: | 90466384 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | J05504 |
|---|---|
| Distance: | 25 |
| Num_trans: | 18160 |
| All_trans: | MGI:97371 |
TATA-Box annotation
| Distance to TSS: | -517 |
|---|---|
| Nearest PromoterID: | NM_008727 |
| Entrez ID: | 18160 |
| Nearest Unigene: | Mm.4627 |
| Nearest Refseq: | NM_008727 |
| Nearest Ensembl: | ENSMUSG00000027931 |
| Gene Name: | natriuretic peptide receptor 1 |
| Gene Alias: | AI893888|GC-A|NPR-A|NPRA|Pndr |
| Gene Description: | natriuretic peptide receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
