Difference between revisions of "TSS:Mm 37280.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000155069.1:-61 uc008ulc.1:-61 AK142602:-61 |chr=chr4 |cpg_percent=0.015 |distance=-61 |distance_to_tss=66 |end=118954858 |entrez_id=100038571...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3651212 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=66 | |distance_to_tss=66 | ||
|end=118954858 | |end=118954858 | ||
| + | |end_of_center_position=118954853 | ||
|entrez_id=100038571 | |entrez_id=100038571 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 12863 | |gene_description=predicted gene 12863 | ||
|gene_id=100038571 | |gene_id=100038571 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_137285 | |nearest_refseq=NR_137285 | ||
|nearest_unigene=Mm.426714 | |nearest_unigene=Mm.426714 | ||
| − | |num_trans= | + | |num_trans=100038571 |
|species=mouse | |species=mouse | ||
|start=118954847 | |start=118954847 | ||
| + | |start_of_center_position=118954852 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000155069 | + | |transcript_name=ENSMUST00000155069.1 AK142602 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_37280.1 | |tss_id=mm_37280.1 | ||
Latest revision as of 20:38, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 118954852 |
|---|---|
| End of the center position in the TSS region: | 118954853 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000155069.1 AK142602 |
|---|---|
| Distance: | -61 |
| Num_trans: | 100038571 |
| All_trans: | MGI:3651212 |
TATA-Box annotation
| Distance to TSS: | 66 |
|---|---|
| Nearest PromoterID: | NR_137285 |
| Entrez ID: | 100038571 |
| Nearest Unigene: | Mm.426714 |
| Nearest Refseq: | NR_137285 |
| Nearest Ensembl: | ENSMUSG00000073765 |
| Gene Name: | predicted gene 12863 |
| Gene Alias: | - |
| Gene Description: | predicted gene 12863 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
