Difference between revisions of "TSS:Mm 39161.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK047296:0 AK163831:0 |chr=chr4 |cpg_percent=0.09 |distance=0 |distance_to_tss=400 |end=155601841 |entrez_id=320541 |gc_percent=0.656716 |gene_alias=A53...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AI957035= |
| + | |all_trans=MGI:3697818 | ||
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=400 | |distance_to_tss=400 | ||
|end=155601841 | |end=155601841 | ||
| + | |end_of_center_position=155601817 | ||
|entrez_id=320541 | |entrez_id=320541 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=A530082C11Rik | + | |gene_alias=A530082C11Rik{{!}}AI957035{{!}}Slc35e2a |
| − | |gene_description= | + | |gene_description=solute carrier family 35, member E2 |
|gene_id=100038346 | |gene_id=100038346 | ||
|gene_name=RIKEN cDNA B930046K06 gene | |gene_name=RIKEN cDNA B930046K06 gene | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_177186 | |nearest_refseq=NM_177186 | ||
|nearest_unigene=Mm.306018 | |nearest_unigene=Mm.306018 | ||
| − | |num_trans= | + | |num_trans=100038346 |
|species=mouse | |species=mouse | ||
|start=155601791 | |start=155601791 | ||
| + | |start_of_center_position=155601816 | ||
|strand=- | |strand=- | ||
|transcript_name=AK047296 AK163831 | |transcript_name=AK047296 AK163831 | ||
Latest revision as of 21:19, 27 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 155601816 |
|---|---|
| End of the center position in the TSS region: | 155601817 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK047296 AK163831 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100038346 |
| All_trans: | MGI:3697818 |
TATA-Box annotation
| Distance to TSS: | 400 |
|---|---|
| Nearest PromoterID: | NM_177186 |
| Entrez ID: | 320541 |
| Nearest Unigene: | Mm.306018 |
| Nearest Refseq: | NM_177186 |
| Nearest Ensembl: | ENSMUSG00000042202 |
| Gene Name: | RIKEN cDNA B930046K06 gene |
| Gene Alias: | A530082C11Rik|AI957035|Slc35e2a |
| Gene Description: | solute carrier family 35, member E2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
