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Difference between revisions of "TSS:Mm 39199.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000195694.1:-374 AK132218:-374
+
|all_trans=MGI:3802048 MGI:5610318
 
|chr=chr4
 
|chr=chr4
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 22: Line 22:
 
|nearest_refseq=NR_040563
 
|nearest_refseq=NR_040563
 
|nearest_unigene=Mm.191866
 
|nearest_unigene=Mm.191866
|num_trans=2
+
|num_trans=100038526
 
|species=mouse
 
|species=mouse
 
|start=156022275
 
|start=156022275

Latest revision as of 21:20, 27 July 2021

Basic information about the TSS


TSS ID:mm_39199.1
Species:mouse
Chr:chr4
TSS Classification:no
Start:156022275
End:156022286
Strand:-
TSS Score:1
Start of the center position in the TSS region:156022280
End of the center position in the TSS region:156022281



Gene and protein annotation


Transcript_name:ENSMUST00000195694.1 AK132218
Distance:-374
GeneID:100038526
HGNC/MGI_ID:MGI:3802048 MGI:5610318
UniProt_ID:Q3V1W0
Gene_name:predicted gene 16008; predicted gene, 37090
Gene_symbol:Gm16008 Gm37090
Gene_synonyms:Gm10560
Gene_source:MGI:3802048 MGI:5610318



Transcript annotation


Transcript_name:ENSMUST00000195694.1 AK132218
Distance:-374
Num_trans:100038526
All_trans:MGI:3802048 MGI:5610318



TATA-Box annotation


Distance to TSS:1543
Nearest PromoterID:NR_040563
Entrez ID:100038526
Nearest Unigene:Mm.191866
Nearest Refseq:NR_040563
Nearest Ensembl:
Gene Name:predicted gene 16008; predicted gene, 37090
Gene Alias:-
Gene Description:predicted gene 10560
Gene Type:ncRNA
CpG%:0.03
GC%:0.502488
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):