Difference between revisions of "TSS:Mm 39199.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3802048 MGI:5610318 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=1543 | |distance_to_tss=1543 | ||
|end=156022286 | |end=156022286 | ||
| + | |end_of_center_position=156022281 | ||
|entrez_id=100038526 | |entrez_id=100038526 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 10560 | |gene_description=predicted gene 10560 | ||
|gene_id=100038526 | |gene_id=100038526 | ||
| − | |gene_name= | + | |gene_name=predicted gene 16008; predicted gene, 37090 |
| − | |gene_source=MGI: | + | |gene_source=MGI:3802048 MGI:5610318 |
| − | |gene_symbol= | + | |gene_symbol=Gm16008 Gm37090 |
| − | |gene_synonyms= | + | |gene_synonyms=Gm10560 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id=MGI: | + | |hgnc_mgi_id=MGI:3802048 MGI:5610318 |
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_040563 | |nearest_promoter_id=NR_040563 | ||
|nearest_refseq=NR_040563 | |nearest_refseq=NR_040563 | ||
|nearest_unigene=Mm.191866 | |nearest_unigene=Mm.191866 | ||
| − | |num_trans= | + | |num_trans=100038526 |
|species=mouse | |species=mouse | ||
|start=156022275 | |start=156022275 | ||
| + | |start_of_center_position=156022280 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000195694.1 AK132218 | |transcript_name=ENSMUST00000195694.1 AK132218 | ||
Latest revision as of 21:20, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 156022280 |
|---|---|
| End of the center position in the TSS region: | 156022281 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000195694.1 AK132218 |
|---|---|
| Distance: | -374 |
| Num_trans: | 100038526 |
| All_trans: | MGI:3802048 MGI:5610318 |
TATA-Box annotation
| Distance to TSS: | 1543 |
|---|---|
| Nearest PromoterID: | NR_040563 |
| Entrez ID: | 100038526 |
| Nearest Unigene: | Mm.191866 |
| Nearest Refseq: | NR_040563 |
| Nearest Ensembl: | |
| Gene Name: | predicted gene 16008; predicted gene, 37090 |
| Gene Alias: | - |
| Gene Description: | predicted gene 10560 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
