Difference between revisions of "TSS:Mm 43304.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000100641.2:-55 AK142429:-55 |chr=chr5 |cpg_percent=0.02 |distance=-55 |distance_to_tss=1694 |end=134676563 |entrez_id=16885 |gc_percent=0.5870...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |LIMK-1= |
| + | |Limk= | ||
| + | |all_trans=MGI:3642774 | ||
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=1694 | |distance_to_tss=1694 | ||
|end=134676563 | |end=134676563 | ||
| + | |end_of_center_position=134676554 | ||
|entrez_id=16885 | |entrez_id=16885 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=KIZ-1 | + | |gene_alias=KIZ-1{{!}}LIMK-1{{!}}Limk |
| − | |gene_description= | + | |gene_description=LIM-domain containing, protein kinase |
|gene_id=100038504 | |gene_id=100038504 | ||
|gene_name=predicted gene 10369 | |gene_name=predicted gene 10369 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=MGI:3642774 | |hgnc_mgi_id=MGI:3642774 | ||
|nearest_ensembl=ENSMUSG00000029674 | |nearest_ensembl=ENSMUSG00000029674 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_131247 |
|nearest_refseq=NM_010717 | |nearest_refseq=NM_010717 | ||
|nearest_unigene=Mm.15409 | |nearest_unigene=Mm.15409 | ||
| − | |num_trans= | + | |num_trans=100038504 |
|species=mouse | |species=mouse | ||
|start=134676544 | |start=134676544 | ||
| + | |start_of_center_position=134676553 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000100641.2 AK142429 | |transcript_name=ENSMUST00000100641.2 AK142429 | ||
Latest revision as of 22:51, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 134676553 |
|---|---|
| End of the center position in the TSS region: | 134676554 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000100641.2 AK142429 |
|---|---|
| Distance: | -55 |
| Num_trans: | 100038504 |
| All_trans: | MGI:3642774 |
TATA-Box annotation
| Distance to TSS: | 1694 |
|---|---|
| Nearest PromoterID: | NR_131247 |
| Entrez ID: | 16885 |
| Nearest Unigene: | Mm.15409 |
| Nearest Refseq: | NM_010717 |
| Nearest Ensembl: | ENSMUSG00000029674 |
| Gene Name: | predicted gene 10369 |
| Gene Alias: | KIZ-1|LIMK-1|Limk |
| Gene Description: | LIM-domain containing, protein kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
