Difference between revisions of "TSS:Mm 72104.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3686743 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=4543 | |distance_to_tss=4543 | ||
|end=71602208 | |end=71602208 | ||
| + | |end_of_center_position=71602190 | ||
|entrez_id=100037278 | |entrez_id=100037278 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=Bcnp1 | |gene_alias=Bcnp1 | ||
| − | |gene_description= | + | |gene_description=family with sequence similarity 129, member C |
|gene_id=100037278 | |gene_id=100037278 | ||
| − | |gene_name= | + | |gene_name=niban apoptosis regulator 3 |
|gene_source=MGI:3686743 | |gene_source=MGI:3686743 | ||
| − | |gene_symbol= | + | |gene_symbol=Niban3 |
| − | |gene_synonyms=Bcnp1 | + | |gene_synonyms=Bcnp1 Fam129c |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3686743 | |hgnc_mgi_id=MGI:3686743 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001166213 | |nearest_refseq=NM_001166213 | ||
|nearest_unigene=Mm.482159 | |nearest_unigene=Mm.482159 | ||
| − | |num_trans= | + | |num_trans=100037278 |
|species=mouse | |species=mouse | ||
|start=71602170 | |start=71602170 | ||
| + | |start_of_center_position=71602189 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000125525.7 | |transcript_name=ENSMUST00000125525.7 | ||
Latest revision as of 09:29, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 71602189 |
|---|---|
| End of the center position in the TSS region: | 71602190 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000125525.7 |
|---|---|
| Distance: | 59 |
| Num_trans: | 100037278 |
| All_trans: | MGI:3686743 |
TATA-Box annotation
| Distance to TSS: | 4543 |
|---|---|
| Nearest PromoterID: | NM_001166213 |
| Entrez ID: | 100037278 |
| Nearest Unigene: | Mm.482159 |
| Nearest Refseq: | NM_001166213 |
| Nearest Ensembl: | ENSMUSG00000043243 |
| Gene Name: | niban apoptosis regulator 3 |
| Gene Alias: | Bcnp1 |
| Gene Description: | family with sequence similarity 129, member C |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
