Difference between revisions of "TSS:Mm 78050.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|Miwi2= | |Miwi2= | ||
| − | |all_trans= | + | |all_trans=MGI:3642794 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=91 | |distance=91 | ||
| − | |distance_to_tss= | + | |distance_to_tss=13849 |
|end=14704551 | |end=14704551 | ||
|end_of_center_position=14704539 | |end_of_center_position=14704539 | ||
|entrez_id=330890 | |entrez_id=330890 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=9230101H05Rik | + | |gene_alias=9230101H05Rik{{!}}Miwi2{{!}}mAgo5 |
|gene_description=piwi-like RNA-mediated gene silencing 4 | |gene_description=piwi-like RNA-mediated gene silencing 4 | ||
|gene_id=100038437 | |gene_id=100038437 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:3642794 | |hgnc_mgi_id=MGI:3642794 | ||
|nearest_ensembl=ENSMUSG00000036912 | |nearest_ensembl=ENSMUSG00000036912 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001368836 |
|nearest_refseq=NM_177905 | |nearest_refseq=NM_177905 | ||
|nearest_unigene=Mm.334969 | |nearest_unigene=Mm.334969 | ||
| − | |num_trans= | + | |num_trans=100038437 |
|species=mouse | |species=mouse | ||
|start=14704525 | |start=14704525 | ||
Latest revision as of 11:38, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 14704538 |
|---|---|
| End of the center position in the TSS region: | 14704539 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000128327.1 AK138480 |
|---|---|
| Distance: | 91 |
| Num_trans: | 100038437 |
| All_trans: | MGI:3642794 |
TATA-Box annotation
| Distance to TSS: | 13849 |
|---|---|
| Nearest PromoterID: | NM_001368836 |
| Entrez ID: | 330890 |
| Nearest Unigene: | Mm.334969 |
| Nearest Refseq: | NM_177905 |
| Nearest Ensembl: | ENSMUSG00000036912 |
| Gene Name: | predicted gene 10706 |
| Gene Alias: | 9230101H05Rik|Miwi2|mAgo5 |
| Gene Description: | piwi-like RNA-mediated gene silencing 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
