Personal tools

Difference between revisions of "TSS:Mm 79222.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|ENSMUSG00000079564=
 
|ENSMUSG00000079564=
|all_trans=ENSMUST00000068730.3:-2 AK017085:-2 ENSMUST00000215465.1:-20 BC049643:-20 ENSMUST00000216483.1:-50 NR_029465:-50 AK015955:-50
+
|all_trans=MGI:3642683
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 23: Line 23:
 
|nearest_refseq=NR_029465
 
|nearest_refseq=NR_029465
 
|nearest_unigene=Mm.437541
 
|nearest_unigene=Mm.437541
|num_trans=7
+
|num_trans=100036537
 
|species=mouse
 
|species=mouse
 
|start=49518337
 
|start=49518337

Latest revision as of 12:03, 28 July 2021

Basic information about the TSS


TSS ID:mm_79222.1
Species:mouse
Chr:chr9
TSS Classification:yes
Start:49518337
End:49518340
Strand:+
TSS Score:1
Start of the center position in the TSS region:49518338
End of the center position in the TSS region:49518339



Gene and protein annotation


Transcript_name:ENSMUST00000068730.3 AK017085
Distance:-2
GeneID:100036537
HGNC/MGI_ID:MGI:3642683
UniProt_ID:Q9D3T0
Gene_name:predicted gene 11149
Gene_symbol:Gm11149
Gene_synonyms:
Gene_source:MGI:3642683



Transcript annotation


Transcript_name:ENSMUST00000068730.3 AK017085
Distance:-2
Num_trans:100036537
All_trans:MGI:3642683



TATA-Box annotation


Distance to TSS:51
Nearest PromoterID:NR_029465
Entrez ID:100036537
Nearest Unigene:Mm.437541
Nearest Refseq:NR_029465
Nearest Ensembl:ENSMUSG00000079564
Gene Name:predicted gene 11149
Gene Alias:-
Gene Description:predicted gene 11149
Gene Type:ncRNA
CpG%:0.01
GC%:0.502488
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):