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Difference between revisions of "TSS:Mm 9975.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000195117.1:-80 AB291912:-80
+
|all_trans=MGI:109384
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 22: Line 22:
 
|nearest_refseq=NM_001033188
 
|nearest_refseq=NM_001033188
 
|nearest_unigene=Mm.16927
 
|nearest_unigene=Mm.16927
|num_trans=2
+
|num_trans=11910
 
|species=mouse
 
|species=mouse
 
|start=191217932
 
|start=191217932

Latest revision as of 19:33, 28 July 2021

Basic information about the TSS


TSS ID:mm_9975.1
Species:mouse
Chr:chr1
TSS Classification:no
Start:191217932
End:191217959
Strand:-
TSS Score:1
Start of the center position in the TSS region:191217945
End of the center position in the TSS region:191217946



Gene and protein annotation


Transcript_name:ENSMUST00000195117.1 AB291912
Distance:-80
GeneID:11910
HGNC/MGI_ID:MGI:109384
UniProt_ID:Q4FJW1
Gene_name:activating transcription factor 3
Gene_symbol:Atf3
Gene_synonyms:LRG-21
Gene_source:MGI:109384



Transcript annotation


Transcript_name:ENSMUST00000195117.1 AB291912
Distance:-80
Num_trans:11910
All_trans:MGI:109384



TATA-Box annotation


Distance to TSS:-6508
Nearest PromoterID:NR_151547
Entrez ID:100504360
Nearest Unigene:Mm.16927
Nearest Refseq:NM_001033188
Nearest Ensembl:
Gene Name:activating transcription factor 3
Gene Alias:AU020850
Gene Description:RIKEN cDNA D730003I15 gene
Gene Type:ncRNA
CpG%:0.005
GC%:0.502488
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):