Difference between revisions of "TSS:Mm 99778.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.03 |distance= |distance_to_tss=135227 |end=107335500 |entrez_id=71795 |gc_percent=0.38806 |gene_alias=1110020B03Rik|5830436L09Rik|AI66280...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |5830436L09Rik= | ||
| + | |AI662802= | ||
| + | |AI851387= | ||
| + | |C330017I21Rik= | ||
| + | |Dnr411= | ||
| + | |RDGBB= | ||
| + | |RDGBB1= | ||
| + | |all_trans=NR_166848:424 NR_166849:424 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=135227 | |distance_to_tss=135227 | ||
|end=107335500 | |end=107335500 | ||
| + | |end_of_center_position=107335493 | ||
|entrez_id=71795 | |entrez_id=71795 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| − | |gene_alias=1110020B03Rik | + | |gene_alias=1110020B03Rik{{!}}5830436L09Rik{{!}}AI662802{{!}}AI851387{{!}}C330017I21Rik{{!}}Dnr411{{!}}RDGBB{{!}}RDGBB1{{!}}mrdgBbeta{{!}}rdgB-beta |
| − | |gene_description= | + | |gene_description=phosphatidylinositol transfer protein, cytoplasmic 1 |
| − | |gene_name= | + | |gene_id=102640379 |
| + | |gene_name=predicted gene 11716 | ||
| + | |gene_source=MGI:3649215 | ||
| + | |gene_symbol=Gm11716 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=MGI:3649215 | ||
|nearest_ensembl=ENSMUSG00000040430 | |nearest_ensembl=ENSMUSG00000040430 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001359616 |
|nearest_refseq=NM_145823 | |nearest_refseq=NM_145823 | ||
|nearest_unigene=Mm.397413 | |nearest_unigene=Mm.397413 | ||
| − | |num_trans= | + | |num_trans=2 |
| + | |rdgB-beta= | ||
|species=mouse | |species=mouse | ||
|start=107335485 | |start=107335485 | ||
| + | |start_of_center_position=107335492 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
| Line 23: | Line 39: | ||
|tss_id=mm_99778.1 | |tss_id=mm_99778.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:33, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 107335492 |
|---|---|
| End of the center position in the TSS region: | 107335493 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 2 |
| All_trans: | NR_166848:424 NR_166849:424 |
TATA-Box annotation
| Distance to TSS: | 135227 |
|---|---|
| Nearest PromoterID: | NM_001359616 |
| Entrez ID: | 71795 |
| Nearest Unigene: | Mm.397413 |
| Nearest Refseq: | NM_145823 |
| Nearest Ensembl: | ENSMUSG00000040430 |
| Gene Name: | predicted gene 11716 |
| Gene Alias: | 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta |
| Gene Description: | phosphatidylinositol transfer protein, cytoplasmic 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
