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Difference between revisions of "TSS:Mm 99841.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK007092:0 NR_027883:-9 uc007mcb.1:-9 AK006164:-9 ENSMUST00000190043.1:-37
+
|all_trans=MGI:1915177
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NR_027883
 
|nearest_refseq=NR_027883
 
|nearest_unigene=Mm.394490
 
|nearest_unigene=Mm.394490
|num_trans=5
+
|num_trans=67927
 
|species=mouse
 
|species=mouse
 
|start=109346875
 
|start=109346875

Latest revision as of 19:35, 28 July 2021

Basic information about the TSS


TSS ID:mm_99841.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:109346875
End:109346886
Strand:+
TSS Score:1
Start of the center position in the TSS region:109346880
End of the center position in the TSS region:109346881



Gene and protein annotation


Transcript_name:AK007092
Distance:0
GeneID:67927
HGNC/MGI_ID:MGI:1915177
UniProt_ID:
Gene_name:RIKEN cDNA 1700096J18 gene
Gene_symbol:1700096J18Rik
Gene_synonyms:
Gene_source:MGI:1915177



Transcript annotation


Transcript_name:AK007092
Distance:0
Num_trans:67927
All_trans:MGI:1915177



TATA-Box annotation


Distance to TSS:14
Nearest PromoterID:NR_027883
Entrez ID:67927
Nearest Unigene:Mm.394490
Nearest Refseq:NR_027883
Nearest Ensembl:ENSMUSG00000099630
Gene Name:RIKEN cDNA 1700096J18 gene
Gene Alias:-
Gene Description:RIKEN cDNA 1700096J18 gene
Gene Type:ncRNA
CpG%:0.01
GC%:0.552239
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):