Difference between revisions of "TSS:Mm 99876.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|ESTM12= | |ESTM12= | ||
|X83328= | |X83328= | ||
| − | |all_trans= | + | |all_trans=MGI:104837 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 11: | Line 11: | ||
|entrez_id=13929 | |entrez_id=13929 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=AA408420 | + | |gene_alias=AA408420{{!}}ESTM12{{!}}X83328 |
|gene_description=archaelysin family metallopeptidase 2 | |gene_description=archaelysin family metallopeptidase 2 | ||
|gene_id=13929 | |gene_id=13929 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_025275 | |nearest_refseq=NM_025275 | ||
|nearest_unigene=Mm.211850 | |nearest_unigene=Mm.211850 | ||
| − | |num_trans= | + | |num_trans=13929 |
|species=mouse | |species=mouse | ||
|start=109425608 | |start=109425608 | ||
|start_of_center_position=109425615 | |start_of_center_position=109425615 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000092500.10 | + | |transcript_name=ENSMUST00000092500.10 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_99876.1 | |tss_id=mm_99876.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B1AT59 | + | |uniprot_id=B1AT59 Q400C8 |
}} | }} | ||
Latest revision as of 19:35, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109425615 |
|---|---|
| End of the center position in the TSS region: | 109425616 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000092500.10 |
|---|---|
| Distance: | 324 |
| Num_trans: | 13929 |
| All_trans: | MGI:104837 |
TATA-Box annotation
| Distance to TSS: | -331 |
|---|---|
| Nearest PromoterID: | NM_025275 |
| Entrez ID: | 13929 |
| Nearest Unigene: | Mm.211850 |
| Nearest Refseq: | NM_025275 |
| Nearest Ensembl: | ENSMUSG00000020610 |
| Gene Name: | archaelysin family metallopeptidase 2 |
| Gene Alias: | AA408420|ESTM12|X83328 |
| Gene Description: | archaelysin family metallopeptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
