Difference between revisions of "TSS:Mm 99894.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AW411817= |
| + | |D11Ertd498e= | ||
| + | |all_trans=MGI:3651603 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-4749 | |distance_to_tss=-4749 | ||
|end=109616151 | |end=109616151 | ||
| + | |end_of_center_position=109616138 | ||
|entrez_id=52639 | |entrez_id=52639 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=4930533H01Rik | + | |gene_alias=4930533H01Rik{{!}}AW411817{{!}}D11Ertd498e |
| − | |gene_description= | + | |gene_description=WD repeat domain, phosphoinositide interacting 1 |
|gene_id=102631572 | |gene_id=102631572 | ||
| − | |gene_name= | + | |gene_name=predicted gene 11685 |
| − | |gene_source=MGI:3651603 | + | |gene_source=MGI:3651603 |
| − | |gene_symbol=Gm11685 | + | |gene_symbol=Gm11685 |
| − | |gene_synonyms= | + | |gene_synonyms=Gm29875 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=MGI:3651603 | + | |hgnc_mgi_id=MGI:3651603 |
|nearest_ensembl=ENSMUSG00000041895 | |nearest_ensembl=ENSMUSG00000041895 | ||
|nearest_promoter_id=NM_145940 | |nearest_promoter_id=NM_145940 | ||
|nearest_refseq=NM_145940 | |nearest_refseq=NM_145940 | ||
|nearest_unigene=Mm.35817 | |nearest_unigene=Mm.35817 | ||
| − | |num_trans= | + | |num_trans=102631572 |
|species=mouse | |species=mouse | ||
|start=109616124 | |start=109616124 | ||
| + | |start_of_center_position=109616137 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000141559.1 AK033185 | |transcript_name=ENSMUST00000141559.1 AK033185 | ||
Latest revision as of 19:36, 28 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 109616137 |
|---|---|
| End of the center position in the TSS region: | 109616138 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000141559.1 AK033185 |
|---|---|
| Distance: | 169 |
| Num_trans: | 102631572 |
| All_trans: | MGI:3651603 |
TATA-Box annotation
| Distance to TSS: | -4749 |
|---|---|
| Nearest PromoterID: | NM_145940 |
| Entrez ID: | 52639 |
| Nearest Unigene: | Mm.35817 |
| Nearest Refseq: | NM_145940 |
| Nearest Ensembl: | ENSMUSG00000041895 |
| Gene Name: | predicted gene 11685 |
| Gene Alias: | 4930533H01Rik|AW411817|D11Ertd498e |
| Gene Description: | WD repeat domain, phosphoinositide interacting 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
