Difference between revisions of "TSS:Mm 99899.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | | | + | |RIalpha= |
| + | |Tse-1= | ||
| + | |Tse1= | ||
| + | |all_trans=MGI:104878 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=102 |
|end=109651003 | |end=109651003 | ||
| + | |end_of_center_position=109650965 | ||
|entrez_id=19084 | |entrez_id=19084 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=1300018C22Rik | + | |gene_alias=1300018C22Rik{{!}}RIalpha{{!}}Tse-1{{!}}Tse1 |
| − | |gene_description= | + | |gene_description=protein kinase, cAMP dependent regulatory, type I, alpha |
|gene_id=19084 | |gene_id=19084 | ||
| − | |gene_name= | + | |gene_name=protein kinase, cAMP dependent regulatory, type I, alpha |
|gene_source=MGI:104878 | |gene_source=MGI:104878 | ||
|gene_symbol=Prkar1a | |gene_symbol=Prkar1a | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_021880 | |nearest_refseq=NM_021880 | ||
|nearest_unigene=Mm.30039 | |nearest_unigene=Mm.30039 | ||
| − | |num_trans= | + | |num_trans=19084 |
|species=mouse | |species=mouse | ||
|start=109650925 | |start=109650925 | ||
| + | |start_of_center_position=109650964 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK005039 AK053918 AK145797 AK051068 AK147188 AK083383 AK145860 AK027916 BC003461 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99899.1 | |tss_id=mm_99899.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8C3Z4 | + | |uniprot_id=Q8C3Z4 |
}} | }} | ||
Latest revision as of 19:36, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109650964 |
|---|---|
| End of the center position in the TSS region: | 109650965 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK005039 AK053918 AK145797 AK051068 AK147188 AK083383 AK145860 AK027916 BC003461 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19084 |
| All_trans: | MGI:104878 |
TATA-Box annotation
| Distance to TSS: | 102 |
|---|---|
| Nearest PromoterID: | NM_001313976 |
| Entrez ID: | 19084 |
| Nearest Unigene: | Mm.30039 |
| Nearest Refseq: | NM_021880 |
| Nearest Ensembl: | ENSMUSG00000020612 |
| Gene Name: | protein kinase, cAMP dependent regulatory, type I, alpha |
| Gene Alias: | 1300018C22Rik|RIalpha|Tse-1|Tse1 |
| Gene Description: | protein kinase, cAMP dependent regulatory, type I, alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
