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Difference between revisions of "TSS:Mm 99949.1"

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Line 2: Line 2:
 
|Kcnf1=
 
|Kcnf1=
 
|Kir2.1=
 
|Kir2.1=
|all_trans=ENSMUST00000121873.1:22 LF198972:-22 MA434549:-22 LF231327:41 MA466904:41
+
|all_trans=MGI:3650970
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 24: Line 24:
 
|nearest_refseq=NM_008425
 
|nearest_refseq=NM_008425
 
|nearest_unigene=Mm.4951
 
|nearest_unigene=Mm.4951
|num_trans=5
+
|num_trans=
 
|species=mouse
 
|species=mouse
 
|start=111276053
 
|start=111276053

Latest revision as of 19:37, 28 July 2021

Basic information about the TSS


TSS ID:mm_99949.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:111276053
End:111276078
Strand:+
TSS Score:1
Start of the center position in the TSS region:111276065
End of the center position in the TSS region:111276066



Gene and protein annotation


Transcript_name:ENSMUST00000121873.1
Distance:22
GeneID:
HGNC/MGI_ID:MGI:3650970
UniProt_ID:
Gene_name:predicted gene 11675
Gene_symbol:Gm11675
Gene_synonyms:
Gene_source:MGI:3650970



Transcript annotation


Transcript_name:ENSMUST00000121873.1
Distance:22
Num_trans:
All_trans:MGI:3650970



TATA-Box annotation


Distance to TSS:209902
Nearest PromoterID:NM_008425
Entrez ID:16518
Nearest Unigene:Mm.4951
Nearest Refseq:NM_008425
Nearest Ensembl:ENSMUSG00000041695
Gene Name:predicted gene 11675
Gene Alias:IRK1|Kcnf1|Kir2.1
Gene Description:potassium inwardly-rectifying channel, subfamily J, member 2
Gene Type:protein-coding
CpG%:0.025
GC%:0.373134
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):